Wägele J. W. (1995) Die Antarktis - erdgeschichtliche Brutstätte für exotische Krebse. In: I. Hempel, G. Hempel (ed.), Biologie der Polarmeere, G. Fischer Verlag: 267-274
Wägele, J. W. (1995) On the information content of characters in molecular systematics and comparative morphology. J. Zool. Syst. Evol. Research 33: 42-47
Wägele, J. W., Stanjek, G. (1995): Arthropod 18SrDNA sequences revisited: monophyly of the Tracheata depends on the alignment. J. Zool. Syst. Evol. Research. 33: 75-80
Wägele, J. W., Voelz, J. (1995) Older than the Atlantic Ocean: Discovery of a Microcerberus in North America and erection of Coxicerberus n.gen.. J. Crust. Biol. 15: 733-745
Brey T., Klages M., Dahm C., Gorny M., Gutt J., Hain S., Stiller M., Arntz W., Wägele J.W., Zimmermann A. (1994). Antarctic benthic diversity. Nature 368: 297
Wägele J. W. (1994) Review of methodological problems of computer cladistics exemplified with a case study on isopod phylogeny (Crustacea, Isopoda). Z. zool. Syst. Evolut.forsch. 32: 81-107.
Reboreda P., Wägele J. W., Garmendia J. M. (1994): On rare Arcturidae from the Atlantic coast of Spain with description of Arcturella carlosoteroi n.sp.. Zool. Anz. 233: 251-263.
Wägele J. W. (1994). Notes on Antarctic and South American Serolidae (Crustacea, Isopoda) with remarks on the phylogenetic biogeography and a description of new genera. Zool. Jb. Syst. 121: 3-69.
Gassmann, D., Hille, A. & Naumann, C. M. (1994): Morphometrische Variation in der Kontaktzone zweier Semispezies des Zygaena-transalpina - Komplexes (Lepidoptera: Zygaenidae). Verhandlungen der Deutschen Zoologischen Gesellschaft 87(1) (Short Communications): 223.
Wägele J. W. (1993) Rejection of the "Uniramia" hypothesis and implications of the Mandibulata concept. Zool. Jahrb. Abt. Syst. Ökol. Tiere 120: 253-288.
Böhme, W., Sieling, U. (1993): Zum Zusammenhang zwischen Genitalstruktur, Paarungsverhalten und Fortpflanzungserfolg bei squamaten Reptilien: erste Ergebnisse. - herpetofauna (Weinstadt) 15(82): 15-23.
Wägele J. W. (1992) Synopsis of discussion on relationships between malacostracan groups and reconstruction of the ur-malacostracan. In: E. Dahl, J.O. Strömberg (eds.), The Crustacea, their Origin and Evolution. Acta Zool., Stockholm, 73: 347-348.
Rokicki J., Wägele J. W. (1992) Note on the occurrence and hosts of some parasitic Antarctic isopods (Crustacea, Isopoda). Polish Polar Res. 13: 53-57.
Wägele, J.W. (1992): Benthic ecology in the Southern Ocean and the biology and evolution of Antarctic Isopoda (Crustacea: Peracarida). Verh. Dtsch. Zool. Ges. 85: 259-270